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Bioconductor —
National Cancer Institute   U.S. National Institutes of Health www.cancer.gov

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Home » Tools » Bioconductor

Bioconductor
 

Product Description

Bioconductor is an established open-source collection of software packages for high throughput genome analysis. Packages adapted for caBIG allow preprocessing of microarray data, DNA copy number assessment from gene expression data, and SELDI-TOFF mass spec peak finding.

Related Tools

caGRID

Current Version

  • Current Version Number: 1.0
  • Release Date of Current Version: March 2007

Intended Audiences

Researchers

Tool Download Files

Not released. R software package will be required as a dependent piece.


Domain and Technical Information

  • Area of Focus: Data Analysis and Statistical Tools
  • Primary Workspace: ICR
  • Currently caGrid Enabled?Yes
  • Compatibility Level: Silver (Learn more about compatibility levels)
  • Tool Maturity Assessment Development Phase
  • Architecture Level:  Other or Not Applicable,
  • Installation Level: Intermediate - technical assistance may be required, download may require supporting infrastructure or software
  • System Requirements: 

    Bioconductor is an R-dependent/associated program. See bioconductor.org for background information and the software dependencies for the existing open source tool.


User Support Resources

Applications Support email


Documentation & Training


Presentations, & Demos

None


Developer Institution(s)