Skip Navigation
Bioconductor —
National Cancer Institute   U.S. National Institutes of Health

The caBIG program has been retired, and while this website is being maintained temporarily to prevent broken links and provide access to information on the subset of caBIG projects that were transitioned into the new NCIP program, it will be archived in the near future. For information on the NCI's biomedical informatics program, please visit

The information and links on this website are no longer being updated and are provided for reference purposes only.

Home » Tools » Bioconductor


Product Description

Bioconductor is an established open-source collection of software packages for high throughput genome analysis. Packages adapted for caBIG allow preprocessing of microarray data, DNA copy number assessment from gene expression data, and SELDI-TOFF mass spec peak finding.

Related Tools


Current Version

  • Current Version Number: 1.0
  • Release Date of Current Version: March 2007

Intended Audiences


Tool Download Files

Not released. R software package will be required as a dependent piece.

Domain and Technical Information

  • Area of Focus: Data Analysis and Statistical Tools
  • Primary Workspace: ICR
  • Currently caGrid Enabled?Yes
  • Compatibility Level: Silver (Learn more about compatibility levels)
  • Tool Maturity Assessment Development Phase
  • Architecture Level:  Other or Not Applicable,
  • Installation Level: Intermediate - technical assistance may be required, download may require supporting infrastructure or software
  • System Requirements: 

    Bioconductor is an R-dependent/associated program. See for background information and the software dependencies for the existing open source tool.

User Support Resources

Applications Support email

Documentation & Training

Presentations, & Demos


Developer Institution(s)